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original-paper | 18-February-2020

Impact of Hydrogen on the Transcriptome of Sinorhizobium meliloti 1021 Using RNA-sequencing Technology

, which in turn provides nutrients to the resident bacteria (Spaink 2000). This study aimed to provide a new understanding of the role of hydrogen in the plant-rhizobacterium interaction and gain a better understanding of metabolic processes underlying these relationships using S. meliloti 1021 as a model bacterium. To this end, we conducted transcriptome analysis of S. meliloti 1021 using RNA-sequencing (RNA-Seq) technology to identify differentially expressed genes in the presence and absence of

RUIRUI LIU, LULU LI, ZHIYING LI, WEIWEI WANG

Polish Journal of Microbiology, Volume 69 , ISSUE 1, 39–48

research-article | 30-November-2019

Detoxification-related gene expression accompanies anhydrobiosis in the foliar nematode (Aphelenchoides fragariae)

Zhen Fu, Paula Agudelo, Christina E. Wells

Journal of Nematology, Volume 52 , 1–12

original-paper | 29-October-2021

Chemical Components of Aqueous Extracts of Melia azedarach Fruits and Their Effects on The Transcriptome of Staphylococcus aureus

elusive. Thus, in this study, we tried to extract components from chinaberry fruits using simple boiling water methods, and the differentially expressed genes (DEGs) were detected with RNA-Seq using S. aureus as a model strain. The results demonstrated that various growth and metabolism-related genes and pathways were affected by the aqueous extracts of chinaberry fruits. Moreover, lipids and lipid-like molecules, organic acids, and derivatives were relatively abundant in these extracts

HONG PENG, YING-SI WANG, JIE WANG, SU-JUAN LI, TING-LI SUN, TONG LIU, QING-SHAN SHI, GANG ZHOU, XIAO-BAO XIE

Polish Journal of Microbiology, Volume 70 , ISSUE 4, 447–459

original-paper | 19-March-2021

A Clinical Trial to Evaluate the Efficacy of α-Viniferin in Staphylococcus aureus – Specific Decolonization without Depleting the Normal Microbiota of Nares

MD ABDUR RAHIM, HOONHEE SEO, SUKYUNG KIM, YOON KYOUNG JEONG, HANIEH TAJDOZIAN, MIJUNG KIM, SAEBIM LEE, HO-YEON SONG

Polish Journal of Microbiology, Volume 70 , ISSUE 1, 117–130

research-article | 16-April-2020

De novo transcriptome sequencing and analysis of Anisakis pegreffii (Nematoda: Anisakidae) third-stage and fourth stage larvae

transcriptomic analyses have been focused on A. simplex, a well-known cause of human anisakidosis or on comparative studies with a sibling species, A. pegreffii (Baird et al., 2016; Cavallero et al., 2018; Llorens et al., 2018), but not on A. pegreffii itself. In this study, we obtained transcriptomes of A. pegreffii L3 (APL3) and in vitro-induced L4 by RNA-seq and de novo assembly. Then, we compared transcriptomes of these two different stages of A. pegreffii to provide detailed information on differences

U-Hwa Nam, Jong-Oh Kim, Jeong-Ho Kim

Journal of Nematology, Volume 52 , 1–16

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