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  • Journal Of Nematology

 

research-article | 30-November-2020

Morphological and molecular characterization of Filenchus pseudodiscus n. sp. from east Golestan province, north Iran; with an updated phylogeny of Malenchus Andrássy, 1968 (Tylenchomorpha: Tylenchidae)

the present study, two populations of the family Tylenchidae were recovered from natural forests of Golestan province, north Iran. The first species appeared as being a new member of Filenchus, and the second species belonged to Malenchus gilanensis (Jalalinasab et al., 2019). Thus, the present study aims to (i) characterize the new species using both traditional and molecular criteria, and (ii) update the phylogeny of Malenchus by including M. gilanensis in the LSU tree. Materials and methods

Parnaz Mortazavi, Fariba Heydari, Joaquín Abolafia, Pablo Castillo, Majid Pedram

Journal of Nematology, Volume 53 , 1–14

research-article | 24-April-2020

First report of molecular characterization and phylogeny of Trichuris fossor Hall, 1916 (Nematoda: Trichuridae)

overlapping ranges of measurements (Callejón et al., 2015, 2016; Vejl et al., 2017) and host preference may be more variable than previously thought (Doležalová et al., 2015). Approximately 24 species been reported from rodents, many of which exhibit comparable morphological patterns (Robles et al., 2014; Doležalová et al., 2015; Eberhardt et al., 2019). Understanding the diversity and phylogeny of whipworms is important; false classification limits our acuity of biogeography and conceals the zoonotic

Malorri R. Hughes, Deborah A. Duffield, Dana K. Howe, Dee R. Denver

Journal of Nematology, Volume 52 , 1–6

research-article | 24-April-2020

Mitochondrial COI gene is valid to delimitate Tylenchidae (Nematoda: Tylenchomorpha) species

classification from species level up to family level (Andrássy, 2007; Brzeski, 1998; Qing and Bert, 2019; Siddiqi, 2000). With the improved availability of genetic sequencing, molecular sequences in species diagnosis and phylogeny analysis have consolidated them as one of the most powerful tools in current taxonomy. Among marker genes, the ribosomal RNA (rRNA) genes are being used as the standard barcode for almost all animals and successfully resolved several groups in Nematoda (Bert et al., 2008; Holterman

Mengxin Bai, Xue Qing, Kaikai Qiao, Xulan Ning, Shun Xiao, Xi Cheng, Guokun Liu

Journal of Nematology, Volume 52 , 1–12

research-article | 30-November-2020

An interesting rare tylenchid species, Antarctenchus urmiensis n. sp. (Tylenchomorpha; Psilenchidae) from Urmia Lake islands, northwest Iran, with a discussion on the taxonomy of related genera

The taxonomy and phylogeny of tylenchids have already been studied and revised by several authors (Bert et al., 2008; De Ley and Blaxter, 2002; Holterman et al., 2009; Panahandeh et al., 2019; Sturhan, 2012; Subbotin et al., 2006). Following the molecular phylogenetic study of De Ley and Blaxter (2002), the order Tylenchida Thorne, 1949 sensu Siddiqi (2000), together with the former order Aphelenchida Siddiqi, 1980, formed the infraorder Tylenchomorpha De Ley and Blaxter, 2002 within the order

Mohammad Amiri Bonab, Joaquín Abolafia, Majid Pedram

Journal of Nematology, Volume 53 , 1–14

Article | 03-December-2017

An 18S rDNA Perspective on the Classification of Criconematoidea

Hemicycliophora. The 18S rDNA dataset was insufficient for distinguishing genus boundaries between Criconema, Ogma, and Crossonema. The relationships depicted by the 18S rDNA phylogeny suggest that key morphological characters used in the classification of Criconematidae are not homologous.

THOMAS POWERS, TIMOTHY HARRIS, REBECCA HIGGINS, PETER MULLIN, KIRSTEN POWERS

Journal of Nematology, Volume 49 , ISSUE 3, 236–244

research-article | 25-May-2020

Description and molecular phylogeny of Mesocriconema abolafiai n. sp. (Nematoda: Criconematidae) from Iran

Hossein Mirbabaei Karani, Ali Eskandari, Reza Ghaderi, Akbar Karegar

Journal of Nematology, Volume 52 , 1–17

Research Article | 03-September-2018

Molecular Characterization and Phylogeny of Ditylenchus weischeri from Cirsium arvense in the Prairie Provinces of Canada

Mehrdad Madani, Mario Tenuta

Journal of Nematology, Volume 50 , ISSUE 2, 163–182

research-article | 30-November-2019

On the identity of Eucephalobus oxyuroides (de Man, 1876) Steiner, 1936 (Rhabditida, Cephalobidae), with an updated taxonomy of the genus and notes about its phylogeny

and Renčo (2007; Slovakia), Carrión and Desgarennes (2012; Mexico), Gagarin (2018; Vietnam), and Shurkurovich and Akvarovna (2018; Uzbekistan). Phylogeny and systematics of Eucephalobus Diagnosis (emended) Cephalobidae, Cephalobinae: they are small nematodes, 0.36 to 1.00 mm long, cuticle bearing transverse striation, lateral field with three longitudinal incisures, lip region continuous with the adjacent body and consisting of conoid lips, primary and secondary axils showing similar

Joaquín Abolafia, Reyes Peña-Santiago

Journal of Nematology, Volume 52 , 1–20

research-article | 11-March-2021

Morphology, development stages, and phylogeny of the Rhabditolaimus ulmi (Nematoda: Diplogastridae), a phoront of the bark beetle Scolytus multistriatus from the elm Ulmus glabra Huds. in Northwest Russia

. However, the biology, morphology, and phylogeny of this species have not been well elucidated. Both species were detected in galleries of Scolytus multistriatus (Marsham, 1802), a bark beetle that is known to transmit Dutch elm disease (DED). Their dauer juveniles were also regularly collected in beetle adults, under elytra. The objectives of this paper were to (i) describe and characterize morphologically all developmental stages of R. ulmi, including the dauer juvenile stage, (ii) describe R. ulmi’s

Alexander Y. Ryss, Kristina S. Polyanina, Sergio Álvarez-Ortega, Sergei A. Subbotin

Journal of Nematology, Volume 53 , 1–25

Article | 21-July-2017

Redefinition of Genus Malenchus Andrassy, 1968 (Tylenchomorpha: Tylenchidae) with Additional Data on Ecology

as the closely related Ottolenchus were given based on a combination of morphology and recent molecular data, and their phylogeny were analyzed in a context of Tylenchidae. Furthermore, we test different fungi and moss as a food resource of Malenchus and their feeding behavior is also discussed.

XUE QING, WIM BERT

Journal of Nematology, Volume 49 , ISSUE 2, 189–206

Research Article | 03-December-2018

Improved 18S small subunit rDNA primers for problematic nematode amplification

The 18S small subunit (SSU) ribosomal DNA sequence is one of the most useful molecular loci for identification and phylogeny reconstruction of agriculturally important nematodes. Various pairs of universal primers have been developed in the past to amplify short and long nematode sequences. However, certain nematode taxa were not readily amplified and/or sequenced with the existing primer tools. Frequently, the center region of a roughly 1,000 nucleotide segment would be lost. Therefore new

L. K. Carta, S. Li

Journal of Nematology, Volume 50 , ISSUE 4, 533–542

research-article | 30-November-2018

Morphological and Molecular Characterization of Coslenchus paramaritus n. sp. and C. cancellatus (Cobb, 1925) Siddiqi, 1978 (Nematoda: Tylenchidae) from Iran

clustering (PP = 81%) with two isolates of an unknown species of Coslenchus (JQ005005 and JQ005006), but separated from the sequences of other Coslenchus species. Figure 5: Figure 5: The 50% majority rule consensus trees from Bayesian analysis generated from the D2–D3 expansion fragments of 28 S rRNA gene dataset under GTR+I+G model. Posterior probabilities for BI analysis more than 50% are given for appropriate clades. New sequences are indicated in bold. Discussion In our phylogeny tree, the

Manouchehr Hosseinvand, Ali Eskandari, Reza Ghaderi

journal of nematology, Volume 51 , 1–10

research-article | 30-November-2019

An integrative approach to the study of Helicotylenchus (Nematoda: Hoplolaimidae) Colombian and Brazilian populations associated with Musa crops

allowance for gamma distribution of rate variation (GTR+Γ) in RAxML v8 (Stamatakis, 2014). The phylogeny of Helicotylenchus was inferred using MrBayes v3.2.6 (Ronquist et al., 2012) with the GTR + Γ model. Two independent Metropolis-coupled Markov chain Monte Carlo (MCMCMC) searches were performed for 2 million generations sampling every 2,000 steps. Convergence was assessed using Tracer v1.5 (burn-in = 20% of the samples), and by examining the average standard deviation of split frequencies among

Donald Riascos-Ortiz, Ana Teresa Mosquera-Espinosa, Francia Varón De Agudelo, Claudio Marcelo Gonçalves de Oliveira, Jaime Eduardo Muñoz-Florez

Journal of Nematology, Volume 52 , 1–19

Research Article | 26-September-2018

Occurrence of Sheraphelenchus sucus (Nematoda: Aphelenchoidinae) and Panagrellus sp. (Rhabditida: Panagrolaimidae) Associated with Decaying Pomegranate Fruit in Italy

rRNA gene, D2–D3 expansion domains of the 28S rDNA, the ITS region, and the partial mitochondrial COI were carried out. Sequences of the 18S rRNA gene, the D2–D3 domains, and the ITS were analyzed using several methods for inferring phylogeny to reconstruct the relationships among Sheraphelenchus and Bursaphelenchus species. The bacterial feeder Panagrellus sp. was characterized at the molecular level only. The D2–D3 expansion domains and ITS sequences of this Italian panagrolaimid were determined

ELENA FANELLI, ALBERTO TROCCOLI, NICOLA VOVLAS, GIANLUCA SCARCIA, ANNAMARIA MINCUZZI, SIMONA M. SANZANI, ANTONIO IPPOLITO, FRANCESCA DE LUCA

Journal of Nematology, Volume 49 , ISSUE 4, 418–426

Original Paper | 28-December-2016

Characterization of Endolithic Culturable Microbial Communities in Carbonate Rocks from a Typical Karst Canyon in Guizhou (China)

all bacteria isolated from dolomite and limestone rocks were divided into 4 bacterial groups, including Proteobacteria, Actinobacteria, Firmicutes and Bacteroidetes. For these two kinds of rocks, Proteobacteria was the first dominant group, and Gammaproteobacteria occupied the greatest proportion which might be closely related to Pseudomonas in phylogeny to be the most dominant genera after isolation. Actinobacteria and Bacillus bacteria were also widespread in these two kinds of rock environments

Yuan Tang, Jian-Zhong Cheng, Bin Lian

Polish Journal of Microbiology, Volume 65 , ISSUE 4, 413–423

research-article | 30-November-2019

Molecular identification of Bursaphelenchus cocophilus associated to oil palm (Elaeis guineensis) crops in Tibu (North Santander, Colombia)

Greicy Andrea Sarria, Donald Riascos-Ortiz, Hector Camilo Medina, Yuri Mestizo, Gerardo Lizarazo, Francia Varón De Agudelo

Journal of Nematology, Volume 52 , 1–12

Research Article | 17-October-2018

Characterization of Meloidogyne indica (Nematoda: Meloidogynidae) Parasitizing Neem in India, with a Molecular Phylogeny of the Species

Victor Phani, Satyapal Bishnoi, Amita Sharma, Keith G. Davies, Uma Rao

Journal of Nematology, Volume 50 , ISSUE 3, 387–398

Original Paper | 04-September-2018

Biochemical and Molecular Characterization of a Native Haloalkalophilic Tolerant Strain from the Texcoco Lake

MARISELA YADIRA SOTO-PADILLA, PABLO GORTÁRES-MOROYOQUI, LUIS ALBERTO CIRA-CHÁVEZ, MARÍA ISABEL ESTRADA-ALVARADO

Polish Journal of Microbiology, Volume 67 , ISSUE 3, 377–382

research-article | 18-March-2020

Description of Seinura italiensis n. sp. (Tylenchomorpha: Aphelenchoididae) found in the medium soil imported from Italy

with the SSU rDNA of S. hyrcania (KT354242). The identity value with other sequences was all less than 91%. A number of 38 ektaphelenchid+seinurid, a Noctuidonema sp., an Anomyctus sp., an Peraphelenchus sp., two aphelenchid and three rhabditid SSU sequences were selected for the SSU phylogeny. A number of 52 ektaphelenchid + seinurid, a Noctuidonema sp., two aphelenchid and three rhabditid LSU D2-D3 sequences were selected for the LSU phylogeny. The selection of the sequences for both analyses was

Jianfeng Gu, Munawar Maria, Lele Liu, Majid Pedram

Journal of Nematology, Volume 52 , 1–11

research-article | 13-April-2020

First molecular characterization of an Iranian population of Schistonchus caprifici (Gasparrini, 1864) Cobb, 1927 (Rhabditida; Aphelenchoidea)

Hadi Karimipour Fard, Hamid Zare

Journal of Nematology, Volume 52 , 1–3

research-article | 26-March-2021

First report of Bitylenchus ventrosignatus (Tobar Jiménez, 1969) Siddiqi, 1986 associated with wild grass in Botswana

Ebrahim Shokoohi

Journal of Nematology, Volume 53 , 1–9

research-article | 30-November-2018

Data of an Iranian Population of L. proximus Sturhan & Argo, 1983, with taxonomic revision of L. israelensis Peneva, Orion, Shlevin, Bar-Eyal & Brown, 1998 (Nematoda: Longidoridae) and Proposal for a New Synonymy

accession numbers given in LSU and ITS1 trees. Phylogenetic analyses The newly generated sequences were compared with the available sequences in the GenBank database using the basic local alignment search tool (BLAST) (https:// blast.ncbi.nlm.nih.gov/Blast.cgi). For LSU phylogeny, several available sequences of the genus were retrieved from the database (a large and a smaller pruned LSU datasets were prepared). The currently available ITS1 sequences of Longidorus spp. were retrieved for the ITS1

Mazdosht Giti, Leila Kashi, Majid Pedram

journal of nematology, Volume 51 , 1–11

research-article | 03-June-2019

PCR amplification of a long rDNA segment with one primer pair in agriculturally important nematodes

L. K. Carta, S. Li

Journal of Nematology, Volume 51 , 1–8

Article | 21-July-2017

Morphological and Molecular Characterization of Two Aphelenchoides Endophytic in Poplar Leaves

LYNN K. CARTA, SHIGUANG LI, ANDREA M. SKANTAR, GEORGE NEWCOMBE

Journal of Nematology, Volume 48 , ISSUE 1, 28–33

Article | 24-July-2017

Cryptaphelenchus varicaudatus n. sp. (Rhabditida: Ektaphelenchinae) from Tehran Province, Iran

MAJID PEDRAM

Journal of Nematology, Volume 49 , ISSUE 2, 223–230

research-article | 30-November-2020

A new cyst-forming nematode, Cactodera tianzhuensis n. sp. (Nematoda:Heteroderinae) from Polygonum viviparum in China with a key to the Genus Cactodera

Wenhao Li, Huixia Li, Chunhui Ni, Mingming Shi, Xuejuan Wei, Yonggang Liu, Yiwen Zhang, Deliang Peng

Journal of Nematology, Volume 53 , 1–15

research-article | 30-November-2020

Pristionchus trametes n. sp. (Diplogastridae) isolated from the mushroom Trametes orientalis in Kyoto, Japan

described in Hooper, 1986). Mounted specimens were used for morphological observations and morphometric analyses, and kept as type specimens. All micrographs were obtained using a digital camera system (MC170 HD; Leica), and morphological drawings were made using a drawing tube connected to the microscope. To prepare the figures, the micrographs and drawings were edited using Photoshop 2019 (Adobe). Molecular profiles and phylogeny The nematodes transferred to NDB were digested at 55°C for 30 min, and

Natsumi Kanzaki, Keiko Hamaguchi

Journal of Nematology, Volume 53 , 1–13

Research Article | 03-September-2018

First Report of Carrot Cyst Nematode Heterodera carotae in Mexico: Morphological, Molecular Characterization, and Host Range Study

Ilia Mariana Escobar-Avila, Edgar Óliver López-Villegas, Sergei A. Subbotin, Alejandro Tovar-Soto

Journal of Nematology, Volume 50 , ISSUE 2, 229–242

research-article | 30-November-2019

Oostenbrinkia pedrami n. sp. (Dorylaimida: Aulolaimoididae) from Iran, with molecular phylogenetic relationships to some other Dorylaimida Pearse, 1942

morphometric data ranges after the type and the second Iranian population by Pedram et al. (2012)) by longer females (747 (648-920) vs 390-530 µm), longer odontostyle (7 (6-8) vs 4 µm), and total stylet (27 (24-29) vs 16-20 µm). Molecular profiles and phylogenetic status A 1,562 nucleotide long sequence from Oostenbrinkia pedrami n. sp. (MT860062) was used to infer the SSU phylogeny together with 28 sequences of Tylencholaimoidea and other assorted Dorylaimida (Pearse, 1942). Sequences from two species

Farahnaz Jahanshahi Afshar

Journal of Nematology, Volume 52 , 1–7

research-article | 24-November-2020

Description of Heterodera microulae sp. n. (Nematoda: Heteroderinae) from China – a new cyst nematode in the Goettingiana group

Wenhao Li, Huixia Li, Chunhui Ni, Deliang Peng, Yonggang Liu, Ning Luo, Xuefen Xu

Journal of Nematology, Volume 52 , 1–16

research-article | 11-March-2021

Morphological and molecular characters of Scutellonema brachyurus (Steiner, 1938) Andrássy, 1958 from South Africa

; and (VII) S. brachyurus with 0.63 posterior probability. Figure 6: The Bayesian tree inferred from known and newly sequenced S. brachyurus from South Africa based on COI of mtDNA region. Discussion Our phylogenetic analysis using 28 S rDNA and COI of mtDNA (Figures 4 and 5) placed the South African S. brachyurus populations, together with the other S. brachyurus. Additionally, based on 28 S rDNA phylogeny, S. brachyurus and S. clavicaudatum place together in a clade with support of a 1.00

Ebrahim Shokoohi

journal of nematology, Volume 53 , 1–13

research-article | 25-May-2020

Morphological and molecular characterization of Ektaphelenchoides pini (Massey, 1966) Baujard, 1984 (Aphelenchoididae; Ektaphelenchinae) from Iran, with morphological and taxonomic observations on some species

poinari (Aliramaji et al., 2014) revealed that a slightly projecting structure is present slightly anterior to the cloacal opening. This could be the single precloacal P1 papilla, or the paired papillae, similar to those in E. pini. The last pair is situated at 14.5 µm distance to the tail tip. The arrangement and number of papilla for this species are amended herein. Molecular characterization and phylogenetic relationships Partial SSU rDNA phylogeny To determine the phylogenetic relationships of

Fariba Heydari, Majid Pedram

Journal of Nematology, Volume 52 , 1–12

Article | 21-July-2017

First Report of the Spiral Nematode Rotylenchus incultus (Nematoda: Hoplolaimidae) from Cultivated Olive in Tunisia, with Additional Molecular Data on Rotylenchus eximius

ILHEM GUESMI-MZOUGHI, ANTONIO ARCHIDONA-YUSTE, CAROLINA CANTALAPIEDRA-NAVARRETE, HAJER REGAIEG, NAJET HORRIGUE-RAOUANI, JUAN E. PALOMARES-RIUS, PABLO CASTILLO

Journal of Nematology, Volume 48 , ISSUE 3, 136–138

Article | 21-July-2017

Paurodontella parapitica n. sp. (Nematoda: Hexatylina, Sphaerularioidea) from Kermanshah Province, Western Iran

MEHRAB ESMAEILI, RAMIN HEYDARI, WEIMIN YE

Journal of Nematology, Volume 48 , ISSUE 2, 109–115

Article | 24-July-2017

Discopersicus n. gen., a New Member of the Family Tylenchidae Örley, 1880 with Detailed SEM Study on Two Known Species of the Genus Discotylenchus Siddiqi, 1980 (Nematoda; Tylenchidae) from Iran

ALI YAGHOUBI, EBRAHIM POURJAM, SERGIO A LVAREZ-ORTEGA, GRACIA LIE´BANAS, MOHAMMAD REZA ATIGHI, MAJID PEDRAM

Journal of Nematology, Volume 48 , ISSUE 3, 214–221

Research Article | 03-December-2018

Two nematodes (Nematoda: Diplogastridae, Rhabditidae) from the invasive millipede Chamberlinius hualienensis Wang, 1956 (Diplopoda, Paradoxosomatidae) on Hachijojima Island in Japan

L. K. Carta, W. K. Thomas, V. B. Meyer-Rochow

Journal of Nematology, Volume 50 , ISSUE 4, 479–486

research-article | 30-November-2018

Molecular and morphological characterization of Paurodontella composticola n. sp. (Nematoda: Hexatylina, Sphaerulariidae) from Iran

Paurodontus by having the stylet with asymmetrical basal knobs (vs asymmetrical), and by the presence of a rudimentary PUS (vs prominent). It can also be distinguished from Paurodontoides by having a rudimentary PUS (vs prominent) and having a leptoderan (vs peloderan) bursa. Molecular phylogeny The amplification of the partial 28S D2/D3 rDNA gene sequence from Paurodontella composticola n. sp. specimens yielded a single fragment of approximately 800 bp based on gel size. To determine the phylogenetic

Mehrab Esmaeili, Ramin Heydari, Ahmad Kheiri, Weimin Ye

Journal of Nematology, Volume 51 , 1–12

research-article | 24-April-2020

Cephalenchus driekieae n. sp. (Nematoda: Tylenchidae) from South Africa, a new member of the genus with a long pharyngeal overlap

phylogenetic studies have focused specifically on Cephalenchus, investigating several aspects of its evolution including inter- and intraspecies and intragenomic variations, correlation of morphology and phylogeny and biogeography (Pereira and Baldwin, 2016; Pereira et al., 2017). During our recent surveys in South Africa, a population of Cephalenchus with a remarkably short stylet, long pharyngeal overlap, and four lines in the lateral field was recovered from the rhizosphere of grasses near a maize field

Milad Rashidifard, Gerhard Du Preez, Joaquín Abolafia, Majid Pedram

Journal of Nematology, Volume 52 , 1–10

research-article | 30-November-2019

Aphelenchus yinyuensis n. sp. (Tylenchina: Aphelenchoididae) found in Terminalia sp. in China

other Aphelenchus species is usually short, collapsed, or shrink, without sperm. Molecular characterization and phylogeny The sequences of nearly full-length 18S (1707 bp, GenBank accession numbers MT396110- MT396111), 28S D2-D3 region (772 bp, MT396108-MT396109) and ITS region of rDNA (661 bp, MT396103-MT396104) of A. yinyuensis n. sp. were obtained. Phylogenetic relationships among the isolates were determined separately for each dataset using Bayesian inference (BI), with Caenorhabditis

Gu Jianfeng, Munawar Maria, Yiwu Fang, Liu Lele, Xianfeng Chen, Bo Cai

Journal of Nematology, Volume 52 , 1–12

research-article | 30-November-2020

New insights into the identity of Discolaimium dubium Das, Khan and Loof, 1969 (Dorylaimida) as derived from its morphological and molecular characterization, with the proposal of its transference to Aporcella Andrássy, 2002

as belonging to D. dubium. Their morphological and molecular study should elucidate the evolutionary relationships of this species, and provide new information to understand better the phylogeny of these dorylaimid taxa. Materials and methods Extraction and processing of nematodes Several soil samples were collected from depths ranging from 10 to 40 cm, in the active plant root zone of East-Azarbaijan province, northwest Iran, during the period 2016 to 2017. Nematodes were extracted from soil

Nasir Vazifeh, Gholamreza Niknam, Habibeh Jabbari, Arezoo Naghavi, Reyes Peña-Santiago

Journal of Nematology, Volume 53 , 1–12

Article | 21-July-2017

Molecular and Morphological Characterization of Aphelenchoides fuchsi sp. n. (Nematoda: Aphelenchoididae) Isolated from Pinus eldarica in Western Iran

MEHRAB ESMAEILI, RAMIN HEYDARI, MOZHGAN ZIAIE, JIANFENG GU

Journal of Nematology, Volume 48 , ISSUE 1, 34–42

Article | 21-July-2017

Data on Some Species of the Genus Coslenchus Siddiqi, 1978 (Rhabditida, Tylenchidae) from Iran

YOUSEF PANAHANDEH, EBRAHIM POURJAM, MAJID PEDRAM

Journal of Nematology, Volume 48 , ISSUE 4, 268–279

research-article | 30-November-2018

New data on known species of Hirschmanniella and Pratylenchus (Rhabditida, Pratylenchidae) from Iran and South Africa

Ebrahim Shokoohi, Joaquín Abolafia, Phatu William Mashela, Nafiseh Divsalar

Journal of Nematology, Volume 51 , 1–26

research-article | 30-November-2018

On the synonymy of Trophotylenchulus asoensis and T. okamotoi with T. arenarius, and intra-generic structure of Paratylenchus (Nematoda: Tylenchulidae)

Hossein Mirbabaei, Ali Eskandari, Reza Ghaderi, Akbar Karegar

Journal of Nematology, Volume 51 , 1–14

research-article | 30-November-2020

Description of Longidorella (Saevadorella) caspica n. sp. (Dorylaimida: Nordiidae) from north Iran

, 1999) using the 50% majority rule. To visualize the results of each run in order to check the effective sample size of each parameter, Tracer v1.5 (Rambaut and Drummond, 2009) was used. The output file of MrBayes was visualized using Dendroscope v3.2.8 (Huson and Scornavacca, 2012) and was drawn in CorelDRAW version 17. Table 1. The used sequences in 28S phylogeny of Longidorella (Saevadorella) caspica n. sp., their accession number, locality, and related plants. Species name Accession

Fariba Heydari, Mohammad Reza Atighi, Ebrahim Pourjam, Majid Pedram

Journal of Nematology, Volume 53 , 1–11

research-article | 30-November-2020

Basilaphelenchus hyrcanus n. sp. (Rhabditida: Tylaphelenchinae) associated with bark of a beech tree (Fagus orientalis Lipsky) from northern Iran

(29–30.6), b = 8.3 (7.3–9.5) vs (6.5–7.1), and longer tail length of 30 (28–31) vs ca 24.5 μm. Bionomics Specimens of B. hyrcanus n. sp. were successfully multiplied on a B. cinerea culture. Molecular phylogeny Partial sequences of the 18 S region and D2-D3 28 S expansion segments of the rDNA gene were generated with accession numbers MN888474 (730 bp) and MN888475 (718 bp), respectively. The datasets for phylogenetic trees were composed of 1,529 and 975 total characters in 18 S and D2-D3 28 S

Behrouz Golhasan, Esmaeil Miraeiz, Zahra Tanha maafi, Ramin Heydari

Journal of Nematology, Volume 53 , 1–11

research-article | 05-August-2021

A new aphelench nematode, Basilaphelenchus brevistylus n. sp. (Aphelenchoididae: Tylaphelenchinae) from Pinus massoniana in China

Bashiy Akol, Qiuling Huang, Borong Lin, Honghong Wang, Jinling Liao, Kan Zhuo

Journal of Nematology, Volume 53 , 1–12

Article | 21-July-2017

Description of Aphelenchoides macrospica n. sp. (Nematoda:Aphelenchoididae) from Northwestern Iran

BEHROUZ GOLHASAN, RAMIN HEYDARI, MEHRAB ESMAEILI, ESMAEIL MIRAEIZ

Journal of Nematology, Volume 49 , ISSUE 1, 67–76

Research Article | 03-December-2018

Description of Gracilacus paralatescens n. sp. (Nematoda:Paratylenchinae) found from the rhizosphere of Bamboo in Zhejiang, China

Munawar Maria, Ruihang Cai, Weimin Ye, Thomas O. Powers, Jingwu Zheng

Journal of Nematology, Volume 50 , ISSUE 4, 611–622

research-article | 17-March-2020

Description of Laimaphelenchus sinensis n. sp. (Nematoda: Aphelenchoididae) from declining Chinese pine, Pinus tabuliformis in Beijing, China

Jianfeng Gu, Munawar Maria, Yiwu Fang, Lele Liu, Yong Bian, Xianfeng Chen

Journal of Nematology, Volume 52 , 1–1

research-article | 30-November-2019

First report of Meloidogyne hapla on kiwifruit in South Africa

using CLUSTAL W (Thompson et al., 1994). The length of each alignment was 946 and 1186 bp for ITS rDNA and 28S rDNA, respectively. Bayesian inference was used to reconstruct the phylogeny, with Bayesian trees generated using the Bayesian inference method as implemented in the program MrBayes 3.1.2 (Ronquist and Huelsenbeck, 2003). The GTR + I + G model was selected using jModeltest 2.1.10 (Guindon and Gascuel, 2003; Darriba et al., 2012). Analysis using the GTR + I + G model was initiated with a

Ebrahim Shokoohi, Phatu W. Mashela

Journal of Nematology, Volume 52 , 1–5

research-article | 06-November-2020

Morphological and molecular analyses of a Meloidogyne mali population with high intragenomic rRNA polymorphism

those in the basal clades. In the present study, we reported that a M. mali population was imported from Japan in Ningbo Port, China, with high intragenomic rRNA polymorphisms. We describe this population by detailed morphology and molecular phylogeny, and compare it with other populations in GenBank by mitochondrial COI haplotype network analysis. Materials and methods Isolation and morphological observation of nematodes Roots and a little soil and rhizosphere medium associated with maple (Acer

Jianfeng Gu, Yiwu Fang, Lele Liu

Journal of Nematology, Volume 52 , 1–11

research-article | 30-November-2018

Morphological and Molecular Characterization of Oscheius saproxylicus sp. n. (Rhabditida, Rhabditidae) From Decaying Wood in Spain, With New Insights into the Phylogeny of the Genus and a Revision of its Taxonomy

provided its diagnosis. Sudhaus and Hooper (1994) provided new ideas about the taxonomy and the phylogeny of several rhabditid species: (i) accepted Oscheius as a subgenus of Rhabditis, (ii) regarded it as a monophyletic taxon based on three synapomorphies (long female rectum, terminal duct of the excretory system forwards coiled and with heavily sclerotized wall, and several features of spicule shape), (iii) considered Dolichorhabditis (Andrássy, 1983) as a junior synonym of Oscheius, and (iv

Joaquín Abolafia, Reyes Peña-Santiago

journal of nematology, Volume 51 , 1–21

Article | 21-July-2017

Molecular and Morphological Characterization of Xiphinema chambersi Population from Live Oak in Jekyll Island, Georgia, with Comments on Morphometric Variations

ZAFAR A. HANDOO, LYNN K. CARTA, ANDREA M. SKANTAR, SERGEI A. SUBBOTIN, STEPHEN W. FRAEDRICH

Journal of Nematology, Volume 48 , ISSUE 1, 20–27

Research Article | 31-May-2018

Incidence of Oscheius onirici (Nematoda: Rhabditidae), a potentially entomopathogenic nematode from the marshlands of Wisconsin, USA

Weimin Ye, Shane Foye, Ann E. MacGuidwin, Shawn Steffan

Journal of Nematology, Volume 50 , ISSUE 1, 9–26

Research Article | 17-October-2018

Description of Aphelenchoides giblindavisi n. sp. (Nematoda: Aphelenchoididae), and Proposal for a New Combination

Farzad Aliramaji, Ebrahim Pourjam, Sergio Álvarez-Ortega, Farahnaz Jahanshahi Afshar, Majid Pedram

Journal of Nematology, Volume 50 , ISSUE 3, 437–452

research-article | 30-November-2019

Characterization of a population of Pelodera strongyloides (Nematoda: Rhabditidae) associated with the beetle Lucanus ibericus (Coleoptera: Lucanidae) from Georgia

O. Gorgadze, A. Troccoli, E. Fanelli, E. Tarasco, F. De Luca

Journal of Nematology, Volume 52 , 1–12

research-article | 30-November-2020

Integrative taxonomy, distribution, and host associations of Geocenamus brevidens and Quinisulcius capitatus from southern Alberta, Canada

; longitude – 111° 56′ 37.5″ W); Taber Rural Municipality, Alberta, Canada. Molecular characterization and phylogeny The sequences of partial 18S (GenBank accession numbers MW029450, MW029451 for G. brevidens; MW023248, MW023249 for Q. capitatus), 28S (MW029449 for G. brevidens, MW023387 for Q. capitatus), and the ITS region of the rRNA (MW029446, MW029447, MW029448 for G. brevidens; MW027537, MW027538 for Q. capitatus) of both species were obtained. Phylogenetic relationships among the isolates were

Maria Munawar, Dmytro P. Yevtushenko, Pablo Castillo

Journal of Nematology, Volume 53 , 1–17

research-article | 30-November-2020

Morphological and molecular characterisation of Tripylina gorganensis from the Slovak Republic as a contribution to the redescription of the species

Tripylina clade (Figs 4 and 5). BLAST analysis revealed the sequence identity between T. gorganensis populations from Iran and Slovakia of more than 99% (4 bp difference) in case of 18 S rDNA and of 97–98% (16–20 SNPs) in case of 28 rDNA. Figure 4: 18 S rDNA-based Bayesian phylogeny of the Trischistomatidae and some other representatives of Enoplida. The new population of Tripylina gorganensis is indicated in bold. Numbers near nodes indicate posterior probabilities. ♀♂ = all species from the marked

Marek Renčo, Katarzyna Rybarczyk-Mydłowska, Łukasz Flis, Magdalena Kubicz, Grażyna Winiszewska

Journal of Nematology, Volume 53 , 1–10

Article | 21-July-2017

Steinernema biddulphi n. sp., a New Entomopathogenic Nematode (Nematoda: Steinernematidae) from South Africa

HARUN CIMEN, VLADIMI´R PU°zA, JIRI NERMUT, JUSTIN HATTING, TSHIMA RAMAKUWELA, SELCUK HAZIR

Journal of Nematology, Volume 48 , ISSUE 3, 148–158

Article | 21-July-2017

Occurrence of Belonolaimus in Sinaloa, Northwestern Mexico: A New Report on Distribution and Host Range

MANUEL MUNDO-OCAMPO, J. G. BALDWIN, T. J. PEREIRA, J. R. CAMACHO-BAEZ, A. D. ARMENTA-BOJORQUEZ, M. CAMACHO-HARO, J. O. BECKER

Journal of Nematology, Volume 49 , ISSUE 1, 103–113

research-article | 30-November-2018

Integrative taxonomy of Xiphinema histriae and Xiphinema lapidosum from Spain

. lapidosum seems to be related with X. lupini because of both species clustered together in all the analyses carried out in this study. The present study on the phylogeny based on D2 to D3 segments supported a very weak correlation in the phylogenetic relationships among the different morphospecies groups within Xiphinema, a finding already reported by several authors namely, Gutiérrez-Gutiérrez et al., 2013; De Luca et al., 2014; Tzortzakakis et al., 2014, 2015; Archidona-Yuste et al., 2016a, 2016b

Ruihang Cai, Antonio Archidona-Yuste, Carolina Cantalapiedra-Navarrete, Juan E. Palomares-Rius, Jingwu Zheng, Pablo Castillo

Journal of Nematology, Volume 51 , 1–21

research-article | 30-November-2018

Updated description of Paratylenchus lepidus Raski 1975 and P. minor Sharma, Sharma and Khan, 1986 by integrating molecular and ultra-structural observations

-separated clades and grouped with species having shorter stylets and advuval flap, the species having longer stylets arranged at the basal position of the trees. To this point we suppose only fewer paratylenchid sequences were available for the phylogenetic studies, the inclusion of more sequences from other known species will be helpful to provide a better resolution of paratylenchid phylogeny. Additional remarks Ghaderi et al. (2014) presented a key for the species identification of pin nematodes

Munawar Maria, Wentao Miao, Weimin Ye, Jingwu Zheng

journal of nematology, Volume 51 , 1–13

research-article | 30-November-2018

Description of Hirschmanniella dicksoni n. sp. (Nematoda: Pratylenchidae) from rhizosphere soil of limpograss from Florida, USA

Alemayehu W. Habteweld, Faruk Akyazi, Soumi Joseph, William T. Crow, Eyualem Abebe, Tesfamariam Mekete

Journal of Nematology, Volume 51 , 1–15

research-article | 30-November-2019

Morphological and molecular characterization of Hoplolaimus pararobustus (Schuurmans Stekhoven and Teunissen, 1938) Sher 1963 with its first report on Zea mays roots in Namibia

corms and roots of banana where they were likely to cause damage to the crop (Sikora et al., 2018). Phylogenetic analysis of Hoplolaimus spp. using D2–D3 expansion of 28 S and internal transcribed spacer (ITS1) ribosomal DNA sequences resolved the phylogeny of the genus and were useful in molecular identification of Hoplolaimus spp. (Bae et al., 2008). In addition, the PCR-RFLP method was applied by different researchers to evaluate the genetic diversity of Hoplolaimus spp. (Robbins et al., 2009

Mariette Marais, Esther van den Berg, Hendrika Fourie, Milad Rashidifard

Journal of Nematology, Volume 52 , 1–12

research-article | 30-November-2019

Hemicycliophora ahvasiensis n. sp. (Nematoda: Hemicycliophoridae), and data on a known species, from Iran

cylindroid anteriorly, mostly narrowing to a bluntly triangular or wedge-shaped posterior part). From H. dulli Van den Berg & Tiedt, 2001, a species with close phylogenetic affinities in ITS phylogeny, by shorter stylet (63.3–71.0 vs 73–79 μm), lower Rst (18–21 vs 21–25), lateral field lacking line(s) (vs having one or two lines), lip region continuous with one annulus (vs set off with two annuli), excretory pore located posterior to pharynx base (vs anterior or posterior) and vulva with not or slightly

Sedighe Azimi, Joaquín Abolafia, Majid Pedram

Journal of Nematology, Volume 52 , 1–19

research-article | 30-November-2019

Morphological and molecular characterization of two species of Neothada Khan, 1973 (Nematoda: Tylenchidae) from Iran, with notes on N. cancellata

are related in the clade with N. major (PP = 100). N. hades differs from N. cancellata by 16 bp (2.1%) and from N. major by 11 bp (1.6%), and N. major differs from N. cancellata by 20 bp (1.9%). Discussion In our 28 S rDNA phylogeny, Neothada is highly supported as a valid genus (Figure 6), similar to previously published works (Yaghubi et al., 2015; Hosseinvand et al., 2020a), and as a member of the subfamily Boleodorinae as suggested by Geraert (2008). In this tree, Neothada formed a sister

Manouchehr Hosseinvand, Ali Eskandari, Reza Ghaderi

Journal of Nematology, Volume 52 , 1–10

research-article | 30-November-2020

Laimaphelenchus africanus n. sp. (Tylenchomorpha: Aphelenchoididae) from South Africa, a morphological and molecular phylogenetic study, with an update to the diagnostics of the genus

delimitation of the species, assist in explaining the tentative synonymies (Pedram et al., 2018) and will further clarify the phylogeny of the genus. The genus is known in South Africa by only one representative, L. patulus (Swart, 1997), which has been described based on the traditional criteria. During the present study, a population of the genus, representing an unknown species, was recovered from wood samples of a dead maritime pine tree in Potchefstroom, North-West province, South Africa. Comparisons

Farahnaz Jahanshahi Afshar, Milad Rashidifard, Joaquín Abolafia, Miloslav Zouhar, Hendrika Fourie, Majid Pedram

Journal Of Nematology, Volume 53 , 1–14

Research Article | 03-September-2018

Description of Longidorus azarbaijanensis n. sp. (Dorylaimida: Longidoridae) from Iran

Farshad Gharibzadeh, Ebrahim Pourjam, Majid Pedram

Journal of Nematology, Volume 50 , ISSUE 2, 207–218

Research Article | 17-October-2018

Morphological and Molecular Characterization of Labrys filiformis n. sp. (Rhabditida: Tylenchidae) from Iran

Yousef Panahandeh, Joaquín Abolafia, Ebrahim Pourjam, Robin M. Giblin-Davis, Farahnaz Jahanshahi Afshar, Majid Pedram

Journal of Nematology, Volume 50 , ISSUE 3, 343–354

research-article | 18-March-2020

A new rare nematode Nothocriconemoides hangzhouensis n. sp. (Nematoda: Criconematidae) from Hangzhou, China

-morphological characterization presenting challenges in the taxonomy of criconematids. The phylogeny of the majority of criconematids taxa is not well resolved, and to this point, we only suggest that molecular identification can be an efficient way of identifying species; however, linking the correct molecular information to the detected species is an important aspect. The generic status of new species is assigned primarily on the basis of morphological characters of females and juveniles. This is the

Munawar Maria, Wentao Miao, Ruihang Cai, Pablo Castillo, Jingwu Zheng

Journal of Nematology, Volume 52 , 1–14

research-article | 16-April-2020

A new stunt nematode, Geocenamus chengi n. sp. (Nematoda: Merliniinae) in the rhizosphere of tea (Camellia sinensis) from Zhejiang Province, China

, additional studies are required to shed light on the evolution, phylogeny, and ecological aspects of these nematodes.

Munawar Maria, Wentao Miao, Pablo Castillo, Jingwu Zheng

Journal of Nematology, Volume 52 , 1–13

Article | 21-July-2017

Species Delimitation and Description of Mesocriconema nebraskense n. sp.(Nematoda: Criconematidae), a Morphologically Cryptic, Parthenogenetic Species from North American Grasslands

MAGDALENA OLSON, TIMOTHY HARRIS, REBECCA HIGGINS, PETER MULLIN, KIRSTEN POWERS, SEAN OLSON, THOMAS O. POWERS

Journal of Nematology, Volume 49 , ISSUE 1, 42–66

Article | 04-December-2017

Description of a New Anguinid Nematode, Nothotylenchus phoenixae n. sp. (Nematoda: Anguinidae) Associated with Palm Date Trees and Its Phylogenetic Relations within the Family Anguinidae

MEHRAB ESMAEILI, RAMIN HEYDARI, WEIMIN YE

Journal of Nematology, Volume 49 , ISSUE 3, 268–275

research-article | 30-November-2019

Description of Deladenus brevis n. sp. (Sphaerularioidea: Neotylenchidae) from Iran: a morphological and molecular phylogenetic study

fields (6 vs 10-12) and anteriorly located vulva (V = 89 (87.2-90.3) vs 92 (92-93)). Molecular profiles and phylogenetic status Nearly full length SSU rDNA phylogeny To determine the phylogenetic relationships of D. brevis n. sp. with other species, a newly obtained 1674 nt nearly full length SSU rDNA sequence with accession number MT009494 was used. The BLAST search using this fragment revealed that it is unique, and its identity with other previously submitted sequences to the database is less

Fariba Heydari, Joaquín Abolafia, Majid Pedram

Journal of Nematology, Volume 52 , 1–13

research-article | 30-November-2020

Steinernema sandneri n. sp. (Rhabditida: Steinernematidae), a new entomopathogenic nematode from Poland

Magdalena Lis, Ewa Sajnaga, Marcin Skowronek, Adrian Wiater, Kamila Rachwał, Waldemar Kazimierczak

Journal of Nematology, Volume 53 , 1–24

Research Article | 26-September-2018

Xiphinema japonicum n. sp. (Nematoda: Longidorinae) from the Rhizosphere of Japanese Podocarpus macrophyllus (Thunb.), a Cryptic Species Related to Xiphinema bakeri Williams, 1961

LIRONG ZHAO, WEIMIN YE, MUNAWAR MARIA, MAJID PEDRAM, JIANFENG GU

Journal of Nematology, Volume 49 , ISSUE 4, 404–417

research-article | 24-April-2019

Description of Rotylenchus rhomboides n. sp. and a Belgian population of Rotylenchus buxophilus (Tylenchomorpha: Hoplolaimidae)

morphology and morphometrics along with molecular characteristics and phylogeny of the D2-D3 expansion segment of 28S rDNA, ITS rDNA, and COI mtDNA sequences. Materials and methods Sampling and nematode extraction The soil and root samples were collected around the rhizosphere of banana (Musa basjoo Siebold & Zucc. ex Iinuma) (GPS coordinates N: 51°2′6.8″, E: 3°43′22.7″) and Yam (Dioscorea tokoro) (GPS coordinates: N: 51°2′6.9″, E: 3°43′22.6″) at the Botanical garden of Ghent University. The nematodes

Huu Tien Nguyen, Quang Phap Trinh, Marjolein Couvreur, Phougeishangbam Rolish Singh, Wilfrida Decraemer, Wim Bert

Journal of Nematology, Volume 51 , 1–20

research-article | 30-November-2020

Description of Spinocephalus tessellatus n. gen., n. sp. (Rhabditida, Cephalobidae) from Iran, a nematode with a new morphological pattern at lip region

Joaquín Abolafia, Manouchehr Hosseinvand, Ali Eskandari

Journal of Nematology, Volume 53 , 1–16

research-article | 22-February-2021

Rotylenchus wimbii n. sp. (Nematoda: Hoplolaimidae) associated with finger millet in Kenya

Phougeishangbam Rolish Singh, Gerrit Karssen, Kelvin Gitau, Cecilia Wanjau, Marjolein Couvreur, Njira Njira Pili, Godelieve Gheysen, Wim Bert

Journal of Nematology, Volume 53 , 1–14

research-article | 30-November-2019

Plant-parasitic nematodes associated with sugarcane in Kilimanjaro, Tanzania

Phougeishangbam Rolish Singh, Beatrice E. Kashando, Marjolein Couvreur, Gerrit Karssen, Wim Bert

Journal of Nematology, Volume 52 , 1–17

research-article | 11-January-2021

On the molecular identity of Paratylenchus nanus Cobb, 1923 (Nematoda: Tylenchida)

Sergei A. Subbotin, Guiping Yan, Mihail Kantor, Zafar Handoo

Journal of Nematology, Volume 52 , 1–7

research-article | 30-November-2019

Morphological and molecular characterization of Pratylenchus species from Yam (Dioscorea spp.) in West Africa

Yao A. Kolombia, Oluwadamilola Ogundero, Emmanuel Olajide, Nicole Viaene, P. Lava Kumar, Danny L. Coyne, Wim Bert

Journal of Nematology, Volume 52 , 1–25

research-article | 30-November-2018

Serendipitous identification of Pratylenchus curvicauda from the grainbelt of Western Australia

the most consistent tree representing the relationship of the P. curvicauda samples with other Pratylenchus species. These trees were constructed using the bootstrap method as a test of Phylogeny with 1,000 replicates, where necessary they are presented with the bootstrap values. Representative sequences of Meloidogyne spp. and Radopholus similis, derived from similar regions of the rDNA, were used as outgroups for the phylogenetic analyses. Differences between and within sequences of either the

Farhana Begum, John Fosu-Nyarko, Shashi Sharma, Bill Macleod, Sarah Collins, Michael G. K. Jones

Journal of Nematology, Volume 51 , 1–15

research-article | 30-November-2020

Morphological and molecular characterization of Paratylenchus beltsvillensis n. sp. (Tylenchida: Paratylenchidae) from the rhizosphere of pine tree (Pinus virginiana Mill) in Maryland, USA

described species P. nanjingensis which has a 64–68 µm long stylet grouped with P. bilineatus and P. aculentus. In another study, Wang et al. (2016b) described P. guangzhouensis, a species with the stylet averaging 47 µm long and based on their ITS rRNA phylogeny, the authors showed that this species was clustered with those four species having a long stylet. Recently, Munawar et al. (2021), Singh et al. (2021), Clavero-Camacho et al. (2021) published comprehensive phylogenies of the genus Paratylenchus

Mihail R. Kantor, Zafar A. Handoo, Sergei A. Subbotin, Gary R. Bauchan, Joseph D. Mowery

Journal of Nematology, Volume 53 , 1–10

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